BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026F11SP1|AL428593
(832 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1783 1630 0.0
>3x_Contig1783
Length = 22123
Score = 1630 bits (821), Expect = 0.0
Identities = 830/833 (99%), Gaps = 1/833 (0%)
Strand = Plus / Plus
Query: 1 ataatcgtacagttccttcaacaagttgtcgtcaagcatcttcacgatcaatagcacagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18643 ataatcgtacagttccttcaacaagttgtcgtcaagcatcttcacgatcaatagcacagt 18702
Query: 61 atcagcgcctgcaagtctagcttctaggatttggtactttgagaaaatgaattctttgcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18703 atcagcgcctgcaagtctagcttctaggatttggtactttgagaaaatgaattctttgcg 18762
Query: 121 taatacacatggtcttttcgattcgtcattggcaaatgccacctccaacacttttcttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18763 taatacacatggtcttttcgattcgtcattggcaaatgccacctccaacacttttcttac 18822
Query: 181 atttctcaaatcttcaatggaacctttgaaccagtgaggttcggtcaatacagagatcgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18823 atttctcaaatcttcaatggaacctttgaaccagtgaggttcggtcaatacagagatcgc 18882
Query: 241 tgaagcacctgcctgaccatacttcaacgcttgctctgaagcaacgacactcaaatcaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18883 tgaagcacctgcctgaccatacttcaacgcttgctctgaagcaacgacactcaaatcaat 18942
Query: 301 gtcacccttcgatggagaagctctcttcacttcagccaagactgctgttttctcagtagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18943 gtcacccttcgatggagaagctctcttcacttcagccaagactgctgttttctcagtagc 19002
Query: 361 agttaatcttgcatagaaatcttgtacccttggagctaaacctaacttatagttggcttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19003 agttaatcttgcatagaaatcttgtacccttggagctaaacctaacttatagttggcttc 19062
Query: 421 taaatcagagaaccgataacctgggatcgtcgattgcagttgaacgtcttcacggcgttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19063 taaatcagagaaccgataacctgggatcgtcgattgcagttgaacgtcttcacggcgttt 19122
Query: 481 ttcgtaaatrgtttccaagatagatttcgctttatcagtgctggctgtctttccgagctc 540
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19123 ttcgtaaatagtttccaagatagatttcgctttatcagtgctggctgtctttccgagctc 19182
Query: 541 attcctagccaagttagctgcgttctcatcccaagtacctcctgatacttcaagaatatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19183 attcctagccaagttagctgcgttctcatcccaagtacctcctgatacttcaagaatatt 19242
Query: 601 cttgatcatttgatgcccactctcggtcaagatagattctggatggaattgcacaccttc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19243 cttgatcatttgatgcccactctcggtcaagatagattctggatggaattgcacaccttc 19302
Query: 661 cacagtgtatttcttatgtctcacacccataataattccagtctccgttcttgcactaac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19303 cacagtgtatttcttatgtctcacacccataataattccagtctccgttcttgcactaac 19362
Query: 721 ttcaagcacatcaggaagtgtttccttggcgcca-saagcgaatggtaccgcgtcactgc 779
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 19363 ttcaagcacatcaggaagtgtttccttggcgccagcaagcgaatggtaccgcgtcactgc 19422
Query: 780 gacaccttgaggtacttttctaaagaaaccttttccatcatggaatattggtg 832
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19423 gacaccttgaggtacttttctaaagaaaccttttccatcatggaatattggtg 19475
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5272
Number of Sequences: 1807
Number of extensions: 5272
Number of successful extensions: 28
Number of sequences better than 1.0e-20: 1
length of query: 832
length of database: 10,358,551
effective HSP length: 16
effective length of query: 816
effective length of database: 10,329,639
effective search space: 8428985424
effective search space used: 8428985424
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)